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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3541890_3544740_R

Intron Information:

Intron Rank:

149545

Intron Class:

major

Intron Phase:

Intron Coordinates:

3541890 - 3544740

Intron Length:

2851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATGACACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TGTTTTATGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

75.8

33.3

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

74.2

0.54

69.1

40.7

Minor 5ss

40.6

-1.1

3.2

54.1

45.6

Minor BPS

58.4

0.26

1.6

71.42

34.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030037

3541583 - 3552053

10471