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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3542365_3544740_R

Intron Information:

Intron Rank:

149542

Intron Class:

major

Intron Phase:

Intron Coordinates:

3542365 - 3544740

Intron Length:

2376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TGTCTTTTGAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

75.8

33.3

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

73.6

0.53

74.8

33.8

Minor 5ss

40.6

-1.1

3.2

54.1

45.6

Minor BPS

50.7

-0.1

1.5

57.25

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021062

3541583 - 3552053

10471