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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3544405_3544740_R

Intron Information:

Intron Rank:

149552

Intron Class:

major

Intron Phase:

Intron Coordinates:

3544405 - 3544740

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTACCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAC

U12 Branch Point Sequence:

TGCTCTCTACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

75.8

33.3

Major BPS

52.5

0.06

1.4

65.3

41.6

Major PPT

69.9

0.45

0.8

62.5

33.2

Minor 5ss

40.6

-1.1

3.2

54.1

45.6

Minor BPS

49.3

-0

63.35

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035515

3544353 - 3551736

7384