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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3544849_3551611_R

Intron Information:

Intron Rank:

149543

Intron Class:

major

Intron Phase:

Intron Coordinates:

3544849 - 3551611

Intron Length:

6763

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AACTTTTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.8

83.1

28.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.5

0.78

0.7

77.5

31.3

Minor 5ss

33.3

-1.9

3.4

45.9

43.7

Minor BPS

61.6

0.22

1.3

57.84

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021062

3541583 - 3552053

10471

ENSAPLT00000035515

3544353 - 3551736

7384

ENSAPLT00000032741

3533599 - 3551736

18138

ENSAPLT00000032523

3517699 - 3551736

34038

ENSAPLT00000030037

3541583 - 3552053

10471