Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_35565167_35565769_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35565167 - 35565769

Intron Length:

603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTGGCTTTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

AATCCTTTAACA

Flanking Amino Acid:

SSVPTFLFFKNSQKVDRLDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

72.8

0.51

0.9

65.6

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

0.78

1.1

76.79

33.2

Associated Gene:

Gene:

GLRX3

Ensembl Gene ID:

ENSAPLG00000012790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013343

35558065 - 35577968

19904