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Intron Name: Anas_platyrhynchos_platyrhynchos_6_35729339_35729447_F

Intron Information:

Intron Rank:

144602

Intron Class:

major

Intron Phase:

Intron Coordinates:

35729339 - 35729447

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACCCA

5'SS Class:

major

3'SS Sequence:

TCTTTTATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCCTCTTTTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

64.9

41.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

89.5

0.89

0.7

85.1

27.9

Minor 5ss

37.5

-1.4

3.1

48.7

Minor BPS

62.6

0.48

1.6

75.01

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027913

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043118

35724712 - 35729524

4813