Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_357818_358821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

357818 - 358821

Intron Length:

1004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CCTTTTTAAATT

Flanking Amino Acid:

ANRYFSPNFKVKLFFTKTVE

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.2

87.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.83

0.7

80.3

31.6

Minor 5ss

34.7

-1.7

2.7

42.8

Minor BPS

56.3

0.28

1.7

69.97

42.5

Associated Gene:

Gene:

PTEN

Ensembl Gene ID:

ENSAPLG00000015686

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020758

357632 - 402822

45191

ENSAPLT00000016365

357548 - 402822

45275