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Intron Name: Anas_platyrhynchos_platyrhynchos_6_35790170_35791312_F

Intron Information:

Intron Rank:

142179

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

35790170 - 35791312

Intron Length:

1143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATTC

5'SS Class:

strong_major

3'SS Sequence:

GCATGCAATGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATGAAT

U12 Branch Point Sequence:

TGGGAATGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

81.1

26.4

Major BPS

0.2

1.3

67.7

36.5

Major PPT

59.9

0.22

1.1

51.8

41.6

Minor 5ss

37.1

-1.5

3.2

49.9

46.6

Minor BPS

44.1

-0.3

1.9

59.94

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033833

35789828 - 35791783

1956