Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_359047_369685_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

359047 - 369685

Intron Length:

10639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTTTT

5'SS Class:

major

3'SS Sequence:

TTTCCTCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

ATTAAAGCAAGC

Flanking Amino Acid:

FHKQNKMLKKDKMFHFWVNT

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.2

79.9

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

77.2

0.61

0.7

70.3

30.7

Minor 5ss

41.1

-1

3.1

58.6

Minor BPS

34.2

-1.2

2.4

48.26

40.8

Associated Gene:

Gene:

PTEN

Ensembl Gene ID:

ENSAPLG00000015686

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020758

357632 - 402822

45191

ENSAPLT00000016365

357548 - 402822

45275