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Intron Name: Anas_platyrhynchos_platyrhynchos_6_35965157_35969601_R

Intron Information:

Intron Rank:

148312

Intron Class:

major

Intron Phase:

Intron Coordinates:

35965157 - 35969601

Intron Length:

4445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTCAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATCTTTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.5

28.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.8

0.42

71.6

31.8

Minor 5ss

28.3

-2.5

2.7

32.3

41.9

Minor BPS

69.6

0.61

1.1

73.36

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027159

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047653

35964613 - 35970256

5644