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Intron Name: Anas_platyrhynchos_platyrhynchos_6_36130671_36133794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36130671 - 36133794

Intron Length:

3124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

GCTTCAAGAAAT

Flanking Amino Acid:

RVVIFQREQENKSRPLSRGE

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

75.8

34.3

Major BPS

75.9

0.64

66.1

40.5

Major PPT

89.6

0.89

0.7

84.7

30.1

Minor 5ss

28.4

-2.5

34.8

41.6

Minor BPS

45.3

-0.2

65.81

43.6

Associated Gene:

Gene:

PPP2R2D

Ensembl Gene ID:

ENSAPLG00000006225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025803

36116993 - 36143745

26753

ENSAPLT00000006463

36117875 - 36144359

26485