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Intron Name: Anas_platyrhynchos_platyrhynchos_6_36135652_36138125_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36135652 - 36138125

Intron Length:

2474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCATGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTCTCTTTCATG

Flanking Amino Acid:

RDPFRITALRVPILKPMDLM

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

74.9

36.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

83.4

0.75

0.9

80.8

36.5

Minor 5ss

51.5

0.05

2.3

61.4

43.6

Minor BPS

59.8

0.16

1.8

66.31

42.6

Associated Gene:

Gene:

PPP2R2D

Ensembl Gene ID:

ENSAPLG00000006225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025803

36116993 - 36143745

26753

ENSAPLT00000006463

36117875 - 36144359

26485