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Intron Name: Anas_platyrhynchos_platyrhynchos_6_36139679_36141143_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36139679 - 36141143

Intron Length:

1465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTATCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TCATTGGTAATT

Flanking Amino Acid:

SSALCDRHSKFFEEPEDPSS

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.9

40.9

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

0.74

0.8

76.7

30.8

Minor 5ss

-1.6

45.9

42.4

Minor BPS

45.5

-0.2

2.5

67.41

44.2

Associated Gene:

Gene:

PPP2R2D

Ensembl Gene ID:

ENSAPLG00000006225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025803

36116993 - 36143745

26753

ENSAPLT00000006463

36117875 - 36144359

26485