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Intron Name: Anas_platyrhynchos_platyrhynchos_6_36191168_36193738_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36191168 - 36193738

Intron Length:

2571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGTC

5'SS Class:

strong_major

3'SS Sequence:

ACTTCCCATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TCTTTTTTGACT

Flanking Amino Acid:

QIELQQEKSKVSKLEREKNQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

77.4

30.8

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

69.2

0.43

0.9

63.5

32.5

Minor 5ss

37.9

-1.4

3.2

51.5

45.7

Minor BPS

75.9

0.9

1.1

85.97

34.5

Associated Gene:

Gene:

JAKMIP3

Ensembl Gene ID:

ENSAPLG00000003318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045712

36180976 - 36224557

43582

ENSAPLT00000021036

36180976 - 36226417

45442

ENSAPLT00000003403

36180976 - 36225671

44696