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Intron Name: Anas_platyrhynchos_platyrhynchos_6_36194237_36206868_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36194237 - 36206868

Intron Length:

12632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTAGGAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

GTTTTAGGAACA

Flanking Amino Acid:

RECEREIRRLQLDEKDARRF

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

79.7

33.4

Major BPS

75.5

0.63

40.9

Major PPT

63.7

0.31

1.1

58.8

45.4

Minor 5ss

44.9

-0.6

3.2

63.2

43.8

Minor BPS

46.2

-0.2

2.3

Associated Gene:

Gene:

JAKMIP3

Ensembl Gene ID:

ENSAPLG00000003318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021036

36180976 - 36226417

45442

ENSAPLT00000003403

36180976 - 36225671

44696

ENSAPLT00000045712

36180976 - 36224557

43582