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Intron Name: Anas_platyrhynchos_platyrhynchos_6_36210462_36211522_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36210462 - 36211522

Intron Length:

1061

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGGCCAGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTACAC

U12 Branch Point Sequence:

CTGCACTTACAC

Flanking Amino Acid:

QRKKMTRIPKPVVETFFGYD

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

76.5

34.2

Major BPS

60.5

0.26

1.1

70.3

34.5

Major PPT

53.2

0.07

1.1

53.4

35.7

Minor 5ss

-1.3

48.1

47.6

Minor BPS

45.6

-0.3

1.9

53.97

43.4

Associated Gene:

Gene:

JAKMIP3

Ensembl Gene ID:

ENSAPLG00000003318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021036

36180976 - 36226417

45442

ENSAPLT00000003403

36180976 - 36225671

44696

ENSAPLT00000045712

36180976 - 36224557

43582