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Intron Name: Anas_platyrhynchos_platyrhynchos_6_36217354_36218366_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36217354 - 36218366

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGCACA

5'SS Class:

major

3'SS Sequence:

ACTGTTATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

AATGCAATAACC

Flanking Amino Acid:

LLEFRILELEERERRSPAIN

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

70.5

35.4

Major BPS

70.1

0.5

70.3

31.9

Major PPT

76.1

0.59

0.9

66.5

43.4

Minor 5ss

35.9

-1.6

2.8

41.3

Minor BPS

49.4

-0

64.65

40.1

Associated Gene:

Gene:

JAKMIP3

Ensembl Gene ID:

ENSAPLG00000003318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045712

36180976 - 36224557

43582

ENSAPLT00000021036

36180976 - 36226417

45442

ENSAPLT00000003403

36180976 - 36225671

44696