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Intron Name: Anas_platyrhynchos_platyrhynchos_6_36218609_36220266_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36218609 - 36220266

Intron Length:

1658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

GCTTTTGGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTGTTGTAATT

Flanking Amino Acid:

KKLDILGDNANLTNEEQVVV

Intron Amino Acid Position:

593

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.3

72.8

38.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

73.8

0.53

68.6

42.1

Minor 5ss

38.1

-1.3

3.3

53.7

43.8

Minor BPS

54.5

0.22

2.1

78.3

39.3

Associated Gene:

Gene:

JAKMIP3

Ensembl Gene ID:

ENSAPLG00000003318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045712

36180976 - 36224557

43582

ENSAPLT00000021036

36180976 - 36226417

45442

ENSAPLT00000003403

36180976 - 36225671

44696