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Intron Name: Anas_platyrhynchos_platyrhynchos_6_36223949_36224308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36223949 - 36224308

Intron Length:

360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGGCC

5'SS Class:

major

3'SS Sequence:

TTAAATCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTACTTTTAAAT

Flanking Amino Acid:

RMELIQHAQQRIKELEERIE

Intron Amino Acid Position:

732

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

38.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

66.9

0.38

1.1

61.7

Minor 5ss

28.8

-2.4

3.7

41.9

45.1

Minor BPS

66.1

0.59

1.3

79.29

36.2

Associated Gene:

Gene:

JAKMIP3

Ensembl Gene ID:

ENSAPLG00000003318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045712

36180976 - 36224557

43582

ENSAPLT00000021036

36180976 - 36226417

45442

ENSAPLT00000003403

36180976 - 36225671

44696