Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_36252333_36253044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36252333 - 36253044

Intron Length:

712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

CCCGTATCAAAT

Flanking Amino Acid:

RMAIIWEKCVVPGKMDENDF

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

77.1

37.8

Major BPS

68.5

0.46

73.3

28.9

Major PPT

77.5

0.62

0.8

69.3

36.9

Minor 5ss

37.1

-1.5

3.1

48.8

41.4

Minor BPS

40.7

-0.6

1.8

49.46

44.1

Associated Gene:

Gene:

DPYSL4

Ensembl Gene ID:

ENSAPLG00000003668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018373

36242513 - 36256948

14436

ENSAPLT00000003804

36242444 - 36256948

14505