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Intron Name: Anas_platyrhynchos_platyrhynchos_6_36299357_36300659_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36299357 - 36300659

Intron Length:

1303

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCCAAGCTA

5'SS Class:

weak_major

3'SS Sequence:

TGAGCAAGGACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTAGAG

U12 Branch Point Sequence:

GGTTTTAGAGCC

Flanking Amino Acid:

QRVFPQLLLENGQTGKVAQR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.22

1.2

58.5

38.4

Major BPS

55.2

0.13

1.6

60.7

45.9

Major PPT

48.6

-0

1.2

39.8

42.7

Minor 5ss

20.5

-3.4

29.9

36.9

Minor BPS

43.1

-0.5

1.8

53.58

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022106

36299241 - 36300834

1594