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Intron Name: Anas_platyrhynchos_platyrhynchos_6_36346627_36346912_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

36346627 - 36346912

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

TCTGTCTGAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

83.6

0.76

0.9

77.3

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

61.5

0.44

1.5

75.82

41.6

Associated Gene:

Gene:

LRRC27

Ensembl Gene ID:

ENSAPLG00000023192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017856

36345718 - 36372150

26433