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Intron Name: Anas_platyrhynchos_platyrhynchos_6_36350214_36357231_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36350214 - 36357231

Intron Length:

7018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

GTTTGCTAAATT

Flanking Amino Acid:

NPIKELPTELGSLTSLTALN

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

80.6

31.8

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

77.7

0.62

72.2

42.7

Minor 5ss

37.1

-1.5

2.7

44.2

37.1

Minor BPS

58.9

0.36

2.1

80.32

42.1

Associated Gene:

Gene:

LRRC27

Ensembl Gene ID:

ENSAPLG00000023192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017856

36345718 - 36372150

26433