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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3672146_3676436_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3672146 - 3676436

Intron Length:

4291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAATAA

5'SS Class:

major

3'SS Sequence:

GAGATGCAGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCCCAT

U12 Branch Point Sequence:

CCATCCAGACAT

Flanking Amino Acid:

QSKKAFQNPSWASVPLCSVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

31.3

Major BPS

57.1

0.18

1.4

66.4

42.2

Major PPT

44.2

-0.3

1.2

33.9

Minor 5ss

36.7

-1.5

3.1

43.7

45.9

Minor BPS

41.8

-0.5

55.92

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044048

3670286 - 3676530

6245