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Intron Name: Anas_platyrhynchos_platyrhynchos_6_36779148_36780734_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36779148 - 36780734

Intron Length:

1587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCACTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATGC

Flanking Amino Acid:

VLEGFAVTFFGIVALWSLAL

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

71.5

41.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.6

0.6

0.8

71.3

28.2

Minor 5ss

47.6

-0.2

2.8

61.4

44.4

Minor BPS

53.6

0.09

1.8

67.58

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005542

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025229

36778841 - 36783223

4383

ENSAPLT00000023634

36778841 - 36787010

8170

ENSAPLT00000005738

36778841 - 36783865

5025