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Intron Name: Anas_platyrhynchos_platyrhynchos_6_36913894_36916533_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
36913894 - 36916533

Intron Length:
2640

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATTTTG

5'SS Class:
strong_major

3'SS Sequence:
TATGTACTTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCATAAT

U12 Branch Point Sequence:
TACATCATAATT

Flanking Amino Acid:
LGRLASIVEQVSMLQNQGRE

Intron Amino Acid Position:
107

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.4
0.86
0.9
80.7
34.7

Major BPS
75.2
0.63
1.1
74.5
36.6

Major PPT
77.7
0.62
0.9
70
40.3

Minor 5ss
43.9
-0.7
2.8
58.4
46.2

Minor BPS
54.7
0.23
1.6
70.43
40.6

Associated Gene:

Gene:
ALDH18A1

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

36910260 - 36938743
28484

36910260 - 36938743
28484