Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_36920630_36923066_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36920630 - 36923066

Intron Length:

2437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTGAG

5'SS Class:

major

3'SS Sequence:

TTATTCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTAACATTAACA

Flanking Amino Acid:

DLLIVLSDVEGLFDSPPGSD

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

1.2

66.1

39.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.6

0.78

0.8

82.4

33.7

Minor 5ss

34.5

-1.8

2.9

40.4

45.9

Minor BPS

63.7

0.42

1.7

71.83

39.1

Associated Gene:

Gene:

ALDH18A1

Ensembl Gene ID:

ENSAPLG00000006363

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039678

36910260 - 36938743

28484

ENSAPLT00000006593

36910260 - 36938743

28484