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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3770175_3770743_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3770175 - 3770743

Intron Length:

569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACCCCG

5'SS Class:

major

3'SS Sequence:

TTTCCTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAC

U12 Branch Point Sequence:

TTCGGGCTAACC

Flanking Amino Acid:

RGTGGGGGAIRKGPRLLACP

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.2

53.2

45.5

Major BPS

50.8

0.02

0.9

25.1

Major PPT

0.83

0.7

80.3

31.6

Minor 5ss

38.3

-1.3

48.4

47.3

Minor BPS

41.2

-0.6

2.6

58.49

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046773

3769219 - 3782654

13436

ENSAPLT00000036861

3769219 - 3782654

13436