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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3774268_3775695_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3774268 - 3775695

Intron Length:

1428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TGCCTTTAAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

37.3

Major BPS

73.1

0.58

79.6

29.1

Major PPT

88.9

0.87

0.6

87.4

22.9

Minor 5ss

31.6

-2.1

3.2

41.1

45.6

Minor BPS

47.5

-0.1

1.7

62.52

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039978

3773295 - 3782270

8976