Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_3783803_3784153_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3783803 - 3784153

Intron Length:

351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGAGC

5'SS Class:

major

3'SS Sequence:

TCTTTCTTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACCCAC

U12 Branch Point Sequence:

TGGCCTGCAACC

Flanking Amino Acid:

GCLRVKNDSIRVLAEYCPKL

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

62.4

42.1

Major BPS

48.3

-0.1

1.1

56.1

Major PPT

82.6

0.73

0.9

80.4

31.6

Minor 5ss

38.8

-1.3

3.1

52.2

44.6

Minor BPS

-0.4

2.1

56.69

41.8

Associated Gene:

Gene:

FBXL15

Ensembl Gene ID:

ENSAPLG00000014471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015070

3783613 - 3788167

4555