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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3792235_3792341_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3792235 - 3792341

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGT

5'SS Class:

strong_major

3'SS Sequence:

GGCTCTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCGAAC

U12 Branch Point Sequence:

TGGGGTCGAACG

Flanking Amino Acid:

FYGSVEAPKAGSSALLAEPS

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.5

36.8

Major BPS

46.8

-0.2

1.5

55.3

40.3

Major PPT

75.2

0.57

0.9

65.3

41.1

Minor 5ss

38.5

-1.3

3.4

55.9

48.3

Minor BPS

38.1

-1

2.1

41.19

43.3

Associated Gene:

Gene:

PSD

Ensembl Gene ID:

ENSAPLG00000014121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019229

3791223 - 3821359

30137

ENSAPLT00000014713

3791223 - 3821165

29943

ENSAPLT00000044261

3791290 - 3821359

30070