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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3792799_3796927_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3792799 - 3796927

Intron Length:

4129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

TCCTCAGTGACC

Flanking Amino Acid:

FEAMRKENRERIMDRDTQGM

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

81.8

0.72

0.7

74.4

30.9

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

47.5

-0.2

2.3

62.53

43.5

Associated Gene:

Gene:

PSD

Ensembl Gene ID:

ENSAPLG00000014121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014713

3791223 - 3821165

29943

ENSAPLT00000044261

3791290 - 3821359

30070

ENSAPLT00000019229

3791223 - 3821359

30137