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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3804620_3805110_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3804620 - 3805110

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTACGTGTG

5'SS Class:

major

3'SS Sequence:

CTTTGCATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TCGATCCCACTC

Flanking Amino Acid:

KADVARHLGKNNEFSRMVAG

Intron Amino Acid Position:

654

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

70.1

40.8

Major BPS

0.62

1.4

85.7

34.9

Major PPT

81.4

0.71

0.9

77.9

35.1

Minor 5ss

36.9

-1.5

3.5

48.7

41.9

Minor BPS

38.2

-0.9

1.9

43.04

38.7

Associated Gene:

Gene:

PSD

Ensembl Gene ID:

ENSAPLG00000014121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019229

3791223 - 3821359

30137

ENSAPLT00000014713

3791223 - 3821165

29943