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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3805569_3806351_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3805569 - 3806351

Intron Length:

783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCGGC

5'SS Class:

major

3'SS Sequence:

GCTTGTGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

GGGGCTCTAATC

Flanking Amino Acid:

ECNPNAISSEDGAHTLTCAL

Intron Amino Acid Position:

719

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

Major BPS

82.2

0.8

0.9

81.6

Major PPT

72.5

0.51

65.3

41.1

Minor 5ss

36.2

-1.6

3.3

41.6

45.3

Minor BPS

-0.2

1.7

52.12

39.6

Associated Gene:

Gene:

PSD

Ensembl Gene ID:

ENSAPLG00000014121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014713

3791223 - 3821165

29943

ENSAPLT00000044261

3791290 - 3821359

30070

ENSAPLT00000019229

3791223 - 3821359

30137