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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3818490_3818731_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3818490 - 3818731

Intron Length:

242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGAGC

5'SS Class:

major

3'SS Sequence:

CTGTGACTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TGGCTCTGAAGG

Flanking Amino Acid:

LKGMILYLQKEEYKPGKALA

Intron Amino Acid Position:

867

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

38.8

Major BPS

69.8

0.49

37.5

Major PPT

73.7

0.53

66.1

39.8

Minor 5ss

31.2

-2.1

3.4

42.5

44.6

Minor BPS

46.7

-0.3

1.8

50.09

43.6

Associated Gene:

Gene:

PSD

Ensembl Gene ID:

ENSAPLG00000014121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044261

3791290 - 3821359

30070

ENSAPLT00000019229

3791223 - 3821359

30137

ENSAPLT00000014713

3791223 - 3821165

29943