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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3822358_3822439_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3822358 - 3822439

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGGG

5'SS Class:

major

3'SS Sequence:

GCTTGCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TCCCCCCTGACC

Flanking Amino Acid:

TEAQEKLQSTEIKEDSAYGS

Intron Amino Acid Position:

702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.9

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

76.9

0.61

0.9

69.4

36.8

Minor 5ss

27.5

-2.6

3.6

37.8

Minor BPS

54.7

0.13

1.7

64.2

41.5

Associated Gene:

Gene:

NFKB2

Ensembl Gene ID:

ENSAPLG00000013409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014030

3822030 - 3826629

4600

ENSAPLT00000038515

3822030 - 3826629

4600