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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3822958_3823184_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3822958 - 3823184

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGCGGG

5'SS Class:

major

3'SS Sequence:

GTCTGTGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TGATGCTCATGT

Flanking Amino Acid:

TPLDLTRSQKVRDILLQASQ

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

54.2

Major BPS

79.7

0.74

79.6

35.6

Major PPT

67.8

0.4

61.1

40.1

Minor 5ss

29.2

-2.4

3.4

37.8

Minor BPS

42.2

-0.5

2.3

61.82

47.5

Associated Gene:

Gene:

NFKB2

Ensembl Gene ID:

ENSAPLG00000013409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038515

3822030 - 3826629

4600

ENSAPLT00000030476

3816274 - 3826629

10356

ENSAPLT00000014030

3822030 - 3826629

4600