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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3823245_3823325_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3823245 - 3823325

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCATG

5'SS Class:

major

3'SS Sequence:

GCAGGAGCAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

CGACCCTGAGCA

Flanking Amino Acid:

DTDADPEEQEETGPRPRRCH

Intron Amino Acid Position:

564

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

68.8

43.8

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

39.6

-0.6

1.6

Minor 5ss

36.2

-1.6

3.2

47.3

48.3

Minor BPS

48.1

-0.1

1.7

56.02

42.2

Associated Gene:

Gene:

NFKB2

Ensembl Gene ID:

ENSAPLG00000013409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014030

3822030 - 3826629

4600