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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3825027_3825121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3825027 - 3825121

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGACCCTGACCC

Flanking Amino Acid:

GGAGGFGSGGGGNLSFPYSP

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

38.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

72.2

0.5

0.8

65.4

30.4

Minor 5ss

28.1

-2.5

2.7

31.4

42.8

Minor BPS

0.01

1.8

63.02

41.6

Associated Gene:

Gene:

NFKB2

Ensembl Gene ID:

ENSAPLG00000013409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038515

3822030 - 3826629

4600

ENSAPLT00000030476

3816274 - 3826629

10356

ENSAPLT00000014030

3822030 - 3826629

4600