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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3825242_3825324_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3825242 - 3825324

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAA

U12 Branch Point Sequence:

CGGCCCTGAACC

Flanking Amino Acid:

KQFTYYPVVEDKEEVERKRK

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

57.2

0.18

1.1

48.9

36.6

Major PPT

83.2

0.75

0.7

77.4

24.6

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

57.8

0.23

1.6

61.79

Associated Gene:

Gene:

NFKB2

Ensembl Gene ID:

ENSAPLG00000013409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038515

3822030 - 3826629

4600

ENSAPLT00000030476

3816274 - 3826629

10356

ENSAPLT00000014030

3822030 - 3826629

4600