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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3839561_3839717_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3839561 - 3839717

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTCTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

CCAGCCCTAATA

Flanking Amino Acid:

PPFTASAPTKLLHGPLTP*

Intron Amino Acid Position:

1774

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.9

0.99

0.9

77.1

36.2

Major BPS

69.6

0.49

1.1

69.5

Major PPT

75.5

0.57

0.8

73.6

31.4

Minor 5ss

28.8

-2.4

3.9

42.6

44.4

Minor BPS

49.2

-0

1.8

56.3

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012766

3839370 - 3927262

87893