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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3840596_3840813_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3840596 - 3840813

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGATTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

GTGTCTCTGATT

Flanking Amino Acid:

YMHAGSSDLLLEAIPESLKN

Intron Amino Acid Position:

1641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

66.6

39.9

Major BPS

0.72

38.9

Major PPT

79.4

0.66

0.9

72.6

36.3

Minor 5ss

37.2

-1.4

3.3

46.9

Minor BPS

55.1

0.24

1.7

72.08

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012766

3839370 - 3927262

87893