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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3842945_3843409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3842945 - 3843409

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

GCTTGACTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TGTTGCTTAATG

Flanking Amino Acid:

PASYHTVSLQLLDLMHTLHT

Intron Amino Acid Position:

1475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.1

42.1

Major BPS

79.5

0.73

0.9

36.9

Major PPT

74.1

0.54

66.1

39.9

Minor 5ss

29.9

-2.3

2.6

32.6

42.1

Minor BPS

67.3

0.41

1.8

71.98

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012766

3839370 - 3927262

87893