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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3844721_3846323_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3844721 - 3846323

Intron Length:

1603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

ATTCTCTCAAAA

Flanking Amino Acid:

QVTARADNDTGAQSDSEVSS

Intron Amino Acid Position:

1275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

0.65

1.1

77.4

37.3

Major PPT

77.6

0.62

75.9

38.4

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

56.7

0.21

1.6

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012766

3839370 - 3927262

87893