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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3846547_3846769_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3846547 - 3846769

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTGGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAACAA

U12 Branch Point Sequence:

TGTTCTTTGTCT

Flanking Amino Acid:

LLRREEISAQVLLSLRILLM

Intron Amino Acid Position:

1201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.1

Major BPS

0.1

1.1

61.6

34.2

Major PPT

62.4

0.28

1.1

57.4

43.2

Minor 5ss

30.9

-2.2

3.6

45.9

49.3

Minor BPS

3.5

83.64

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012766

3839370 - 3927262

87893