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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3862174_3862592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3862174 - 3862592

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTCTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAA

U12 Branch Point Sequence:

TTTCCCTAAACT

Flanking Amino Acid:

MREHLKFQLEMYIKKLMEII

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

60.4

0.26

1.1

61.5

32.5

Major PPT

72.2

0.5

1.1

65.9

45.3

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

77.1

0.93

1.6

93.68

34.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012766

3839370 - 3927262

87893