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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3873236_3874472_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3873236 - 3874472

Intron Length:

1237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACCTG

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TGTATTTTGACT

Flanking Amino Acid:

LVDMVQLLFTRLPQFKEEPK

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

45.4

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

90.9

0.92

0.7

88.9

28.1

Minor 5ss

40.8

-1

3.2

55.8

48.4

Minor BPS

67.1

0.62

1.2

79.98

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012766

3839370 - 3927262

87893