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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3875741_3880708_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3875741 - 3880708

Intron Length:

4968

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTACTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTCTGTTACT

Flanking Amino Acid:

VNKFLSYALIDPSHEGTAEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

83.1

28.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.9

0.63

0.9

76.9

36.3

Minor 5ss

42.1

-0.9

2.5

53.5

43.9

Minor BPS

54.9

0.23

2.3

80.69

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012766

3839370 - 3927262

87893