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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3933236_3934109_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3933236 - 3934109

Intron Length:

874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CATTTCTGATTG

Flanking Amino Acid:

VLKEVLNNITECSCSRVSAE

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

84.1

30.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

83.4

0.75

0.9

77.7

35.3

Minor 5ss

47.4

-0.3

2.8

64.4

Minor BPS

47.9

-0.2

1.8

52.68

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017204

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028570

3933027 - 3940449

7423