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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3934177_3935462_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3934177 - 3935462

Intron Length:

1286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

ATATAACCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GCTTTATTAATG

Flanking Amino Acid:

NARWSTHTHLDEERDPLLHS

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.2

28.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

64.4

0.32

56.3

39.2

Minor 5ss

35.2

-1.7

2.8

40.3

40.2

Minor BPS

57.8

0.11

1.7

60.63

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017204

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041223

3916234 - 3940449

24216

ENSAPLT00000028570

3933027 - 3940449

7423